A central problem in historical linguistics is the identification of historically related cognate words. We present a generative phylogenetic model for automatically inducing cogn...
Background: Modern proteomes evolved by modification of pre-existing ones. It is extremely important to comparative biology that related proteins be identified as members of the s...
Adriano Barbosa-Silva, Venkata P. Satagopam, Reinh...
Frequent structure mining (FSM) aims to discover and extract patterns frequently occurring in structural data, such as trees and graphs. FSM finds many applications in bioinformat...
Sequence data for a group of species is often summarized by a distance matrix M where M[s, t] is the dissimilarity between the sequences of species s and t. An ordinal assertion is...
Phylogenetic trees group organisms by their ancestral relationships. There are a number of distinct algorithms used to reconstruct these trees from molecular sequence data, but dif...
George I. Hagstrom, Dehua H. Hang, Charles Ofria, ...