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» Finding min-repros in database software
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BMCBI
2006
129views more  BMCBI 2006»
13 years 5 months ago
Fast index based algorithms and software for matching position specific scoring matrices
Background: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as amino acid sequences....
Michael Beckstette, Robert Homann, Robert Giegeric...
SIGMOD
2010
ACM
221views Database» more  SIGMOD 2010»
13 years 5 months ago
Analyzing the energy efficiency of a database server
Rising energy costs in large data centers are driving an agenda for energy-efficient computing. In this paper, we focus on the role of database software in affecting, and, ultimat...
Dimitris Tsirogiannis, Stavros Harizopoulos, Mehul...
ESEM
2008
ACM
13 years 7 months ago
Phase distribution of software development effort
Effort distribution by phase or activity is an important but often overlooked aspect compared to other steps in the cost estimation process. Poor effort allocation is among the ma...
Ye Yang, Mei He, Mingshu Li, Qing Wang, Barry W. B...
SIGMOD
2010
ACM
207views Database» more  SIGMOD 2010»
13 years 5 months ago
iTuned: a tool for configuring and visualizing database parameters
iTuned is a tool that takes a SQL workload as input and recommends good settings for database configuration parameters such as buffer pool sizes, multi-programming level, and numb...
Vamsidhar Thummala, Shivnath Babu
BMCBI
2010
155views more  BMCBI 2010»
13 years 5 months ago
FunctSNP: an R package to link SNPs to functional knowledge and dbAutoMaker: a suite of Perl scripts to build SNP databases
Background: Whole genome association studies using highly dense single nucleotide polymorphisms (SNPs) are a set of methods to identify DNA markers associated with variation in a ...
Stephen J. Goodswen, Cedric Gondro, Nathan S. Wats...