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ESA
1998
Springer
162views Algorithms» more  ESA 1998»
13 years 9 months ago
External Memory Algorithms
Abstract. Data sets in large applications are often too massive to t completely inside the computer's internal memory. The resulting input output communication or I O between ...
Jeffrey Scott Vitter
BMCBI
2010
143views more  BMCBI 2010»
13 years 6 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
BMCBI
2007
176views more  BMCBI 2007»
13 years 6 months ago
Genome Expression Pathway Analysis Tool - Analysis and visualization of microarray gene expression data under genomic, proteomic
Background: Regulation of gene expression is relevant to many areas of biology and medicine, in the study of treatments, diseases, and developmental stages. Microarrays can be use...
Markus Weniger, Julia C. Engelmann, Jörg Schu...
CAV
2009
Springer
136views Hardware» more  CAV 2009»
14 years 6 months ago
Intra-module Inference
Abstract. Contract-based property checkers hold the potential for precise, scalable, and incremental reasoning. However, it is difficult to apply such checkers to large program mod...
Shuvendu K. Lahiri, Shaz Qadeer, Juan P. Galeotti,...
BMCBI
2006
155views more  BMCBI 2006»
13 years 6 months ago
AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data
Background: DNA microarrays are a powerful tool for monitoring the expression of tens of thousands of genes simultaneously. With the advance of microarray technology, the challeng...
Guoqing Lu, The V. Nguyen, Yuannan Xia, Michael Fr...