6 search results - page 1 / 2 » Flexible taxonomic assignment of ambiguous sequencing reads |
BMCBI
2011
12 years 11 months ago
2011
Background: To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference ...
BMCBI
2011
12 years 8 months ago
2011
Background: The implementation of high throughput sequencing for exploring biodiversity poses high demands on bioinformatics applications for automated data processing. Here we in...
BMCBI
2010
13 years 4 months ago
2010
Background: Metagenomics is the study of environmental samples using sequencing. Rapid advances in sequencing technology are fueling a vast increase in the number and scope of met...
BMCBI
2011
12 years 11 months ago
2011
Background: Computational analysis of metagenomes requires the taxonomical assignment of the genome contigs assembled from DNA reads of environmental samples. Because of the diver...
BMCBI
2008
13 years 4 months ago
2008
Background: In metagenomic studies, a process called binning is necessary to assign contigs that belong to multiple species to their respective phylogenetic groups. Most of the cu...