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NAR
2010
143views more  NAR 2010»
13 years 16 days ago
WormBase: a comprehensive resource for nematode research
WormBase (http://www.wormbase.org) is a central data repository for nematode biology. Initially created as a service to the Caenorhabditis elegans research field, WormBase has evo...
Todd W. Harris, Igor Antoshechkin, Tamberlyn Bieri...
IWOMP
2007
Springer
13 years 12 months ago
Supporting OpenMP on Cell
The Cell processor is a heterogeneous multi-core processor with one Power Processing Engine (PPE) core and eight Synergistic Processing Engine (SPE) cores. Each SPE has a directly...
Kevin O'Brien, Kathryn M. O'Brien, Zehra Sura, Ton...
BMCBI
2008
118views more  BMCBI 2008»
13 years 5 months ago
MetWAMer: eukaryotic translation initiation site prediction
Background: Translation initiation site (TIS) identification is an important aspect of the gene annotation process, requisite for the accurate delineation of protein sequences fro...
Michael E. Sparks, Volker Brendel
BMCBI
2007
265views more  BMCBI 2007»
13 years 5 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
PERVASIVE
2010
Springer
13 years 7 months ago
Specification and Verification of Complex Location Events with Panoramic
We present the design and evaluation of Panoramic, a tool that enables end-users to specify and verify an important family of complex location events. Our approach aims to reduce o...
Evan Welbourne, Magdalena Balazinska, Gaetano Borr...