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» From Gene Trees to Species Trees
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LATA
2009
Springer
13 years 11 months ago
From Gene Trees to Species Trees through a Supertree Approach
Abstract. Gene trees are leaf-labeled trees inferred from molecular sequences. Due to duplication events arising in genome evolution, gene trees usually have multiple copies of som...
Celine Scornavacca, Vincent Berry, Vincent Ranwez
IANDC
2011
148views more  IANDC 2011»
12 years 11 months ago
Building species trees from larger parts of phylogenomic databases
Abstract. Gene trees are leaf-labeled trees inferred from molecular sequences. Due to duplication events arising in genome evolution, gene trees usually have multiple copies of som...
Celine Scornavacca, Vincent Berry, Vincent Ranwez
SIAMCOMP
2000
90views more  SIAMCOMP 2000»
13 years 4 months ago
From Gene Trees to Species Trees
This paper studies various algorithmic issues in reconstructing a species tree from gene trees under the duplication and the mutation cost model. This is a fundamental problem in c...
Bin Ma, Ming Li, Louxin Zhang
RECOMB
1998
Springer
13 years 8 months ago
On reconstructing species trees from gene trees in term of duplications and losses
This paper studies various properties of the least common ancestors mapping, the duplication and mutation costs, and the complexity of nding a species tree from gene trees.
Bin Ma, Ming Li, Louxin Zhang
RECOMB
2008
Springer
14 years 4 months ago
Locating Multiple Gene Duplications through Reconciled Trees
We introduce the first exact and efficient algorithm for Guig?o et al.'s problem that, given a collection of rooted, binary gene trees and a rooted, binary species tree, deter...
J. Gordon Burleigh, Mukul S. Bansal, André ...