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    » Fuzzy Ensemble Clustering for DNA Microarray Data Analysis
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    BMCBI
    2008
    136views more  BMCBI 2008»
    GPAT: Retrieval of genomic annotation from large genomic position datasets
    13 years 4 months ago
    GPAT: Retrieval of genomic annotation from large genomic position datasets
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    Background: Recent genome wide transcription factor binding site or chromatin modification mapping analysis techniques, such as chromatin immunoprecipitation (ChIP) linked to DNA ...
    Arnaud Krebs, Mattia Frontini, Làszlò...
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    KDD
    2002
    ACM
    147views Data Mining» more  KDD 2002»
    Visualized Classification of Multiple Sample Types
    14 years 4 months ago
    Visualized Classification of Multiple Sample Types
    Download  www.cse.buffalo.edu
    The goal of the knowledge discovery and data mining is to extract the useful knowledge from the given data. Visualization enables us to find structures, features, patterns, and re...
    Li Zhang, Aidong Zhang, Murali Ramanathan
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    BMCBI
    2002
    89views more  BMCBI 2002»
    Sources of variability and effect of experimental approach on expression profiling data interpretation
    13 years 4 months ago
    Sources of variability and effect of experimental approach on expression profiling data interpretation
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    Background: We provide a systematic study of the sources of variability in expression profiling data using 56 RNAs isolated from human muscle biopsies (34 Affymetrix MuscleChip ar...
    Marina Bakay, Yi-Wen Chen, Rehannah H. A. Borup, P...
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    CGF
    2008
    142views more  CGF 2008»
    Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context
    13 years 4 months ago
    Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context
    Download  www.win.tue.nl
    DNA microarrays are used to measure the expression levels of thousands of genes simultaneously. In a time series experiment, the gene expressions are measured as a function of tim...
    Michel A. Westenberg, Sacha A. F. T. van Hijum, Os...
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    BMCBI
    2010
    131views more  BMCBI 2010»
    Prediction of epigenetically regulated genes in breast cancer cell lines
    13 years 4 months ago
    Prediction of epigenetically regulated genes in breast cancer cell lines
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    Background: Methylation of CpG islands within the DNA promoter regions is one mechanism that leads to aberrant gene expression in cancer. In particular, the abnormal methylation o...
    Leandro A. Loss, Anguraj Sadanandam, Steffen Durin...
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