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» GenMAPP 2: new features and resources for pathway analysis
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BMCBI
2007
133views more  BMCBI 2007»
13 years 5 months ago
GenMAPP 2: new features and resources for pathway analysis
Background: Microarray technologies have evolved rapidly, enabling biologists to quantify genome-wide levels of gene expression, alternative splicing, and sequence variations for ...
Nathan Salomonis, Kristina Hanspers, Alexander C. ...
BMCBI
2010
175views more  BMCBI 2010»
13 years 5 months ago
The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services
Background: Many complementary solutions are available for the identifier mapping problem. This creates an opportunity for bioinformatics tool developers. Tools can be made to fle...
Martijn P. van Iersel, Alexander R. Pico, Thomas K...
BMCBI
2008
139views more  BMCBI 2008»
13 years 5 months ago
New challenges for text mining: mapping between text and manually curated pathways
Background: Associating literature with pathways poses new challenges to the Text Mining (TM) community. There are three main challenges to this task: (1) the identification of th...
Kanae Oda, Jin-Dong Kim, Tomoko Ohta, Daisuke Okan...
BMCBI
2005
113views more  BMCBI 2005»
13 years 5 months ago
Pathway level analysis of gene expression using singular value decomposition
Background: A promising direction in the analysis of gene expression focuses on the changes in expression of specific predefined sets of genes that are known in advance to be rela...
John K. Tomfohr, Jun Lu, Thomas B. Kepler
ICMCS
2006
IEEE
119views Multimedia» more  ICMCS 2006»
13 years 11 months ago
Adaptive Multimedia Flow Regulation and Delay Analysis for End-Hosts in P2P Networks
This paper proposes a novel adaptive algorithm based on a new soft-regulator (σ, ρ, λ) for concurrent multimedia flows at end hosts. Our algorithm has the following features: ...
Weijia Jia