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CBMS
2008
IEEE
13 years 6 months ago
Generating GO Slim Using Relational Database Management Systems to Support Proteomics Analysis
The Gene Ontology Consortium built the Gene Ontology database (GO) to address the need for a common standard in naming genes and gene products. Using different names for the same ...
Getiria Onsongo, Hongwei Xie, Timothy J. Griffin, ...
BMCBI
2008
124views more  BMCBI 2008»
13 years 5 months ago
RPPAML/RIMS: A metadata format and an information management system for reverse phase protein arrays
Background: Reverse Phase Protein Arrays (RPPA) are convenient assay platforms to investigate the presence of biomarkers in tissue lysates. As with other high-throughput technolog...
Romesh Stanislaus, Mark Carey, Helena F. Deus, Kev...
BMCBI
2006
115views more  BMCBI 2006»
13 years 4 months ago
MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa
Background: Mitochondria are sub-cellular organelles that have a central role in energy production and in other metabolic pathways of all eukaryotic respiring cells. In the last f...
Domenico Catalano, Flavio Licciulli, Antonio Turi,...
SIGMOD
2012
ACM
224views Database» more  SIGMOD 2012»
11 years 7 months ago
Tiresias: the database oracle for how-to queries
How-To queries answer fundamental data analysis questions of the form: “How should the input change in order to achieve the desired output”. As a Reverse Data Management probl...
Alexandra Meliou, Dan Suciu
BMCBI
2010
130views more  BMCBI 2010»
13 years 5 months ago
MLPAinter for MLPA interpretation: an integrated approach for the analysis, visualisation and data management of Multiplex Ligat
Background: Multiplex Ligation-Dependent Probe Amplification (MLPA) is an application that can be used for the detection of multiple chromosomal aberrations in a single experiment...
Ronald van Eijk, Paul H. C. Eilers, Remco Natt&eac...