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Genome-scale disk-based suffix tree indexing
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PSB
2008
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Applied Computing
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TRELLIS+: An Effective Approach for Indexing Genome-Scale Sequences Using Suffix Trees
13 years 10 months ago
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psb.stanford.edu
Benjarath Phoophakdee, Mohammed Javeed Zaki
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CIKM
2008
Springer
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A new method for indexing genomes using on-disk suffix trees
13 years 11 months ago
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We propose a new method to build persistent suffix trees for indexing the genomic data. Our algorithm DiGeST (Disk-Based Genomic Suffix Tree) improves significantly over previous ...
Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upt...
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