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» Genomic Distances under Deletions and Insertions
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BMCBI
2008
125views more  BMCBI 2008»
13 years 4 months ago
A fast algorithm for the multiple genome rearrangement problem with weighted reversals and transpositions
Background: Due to recent progress in genome sequencing, more and more data for phylogenetic reconstruction based on rearrangement distances between genomes become available. Howe...
Martin Bader, Mohamed Ibrahim Abouelhoda, Enno Ohl...
CCCG
2010
13 years 6 months ago
Connected dominating sets on dynamic geometric graphs
We propose algorithms for efficiently maintaining a constant-approximate minimum connected dominating set (MCDS) of a geometric graph under node insertions and deletions. Assuming...
Leonidas J. Guibas, Nikola Milosavljevic, Arik Mot...
CPM
2000
Springer
141views Combinatorics» more  CPM 2000»
13 years 8 months ago
A Lower Bound for the Breakpoint Phylogeny Problem
Breakpoint phylogenies methods have been shown to be an effective way to extract phylogenetic information from gene order data. Currently, the only practical breakpoint phylogeny a...
David Bryant
BMCBI
2006
150views more  BMCBI 2006»
13 years 4 months ago
CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between clos
Background: The recent accumulation of closely related genomic sequences provides a valuable resource for the elucidation of the evolutionary histories of various organisms. Howev...
Ikuo Uchiyama, Toshio Higuchi, Ichizo Kobayashi
FOCS
1994
IEEE
13 years 8 months ago
Randomized and deterministic algorithms for geometric spanners of small diameter
Let S be a set of n points in IRd and let t > 1 be a real number. A t-spanner for S is a directed graph having the points of S as its vertices, such that for any pair p and q o...
Sunil Arya, David M. Mount, Michiel H. M. Smid