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ICS
2001
Tsinghua U.
13 years 9 months ago
Global optimization techniques for automatic parallelization of hybrid applications
This paper presents a novel technique to perform global optimization of communication and preprocessing calls in the presence of array accesses with arbitrary subscripts. Our sche...
Dhruva R. Chakrabarti, Prithviraj Banerjee
BMCBI
2008
126views more  BMCBI 2008»
13 years 5 months ago
NITPICK: peak identification for mass spectrometry data
Background: The reliable extraction of features from mass spectra is a fundamental step in the automated analysis of proteomic mass spectrometry (MS) experiments. Results: This co...
Bernhard Y. Renard, Marc Kirchner, Hanno Steen, Ju...
CSMR
2000
IEEE
13 years 9 months ago
Analyzing Java Software by Combining Metrics and Program Visualization
Shimba, a prototype reverse engineering environment, has been built to support the understanding of Java software. Shimba uses Rigi and SCED to analyze, visualize, and explore the...
Tarja Systä, Ping Yu, Hausi A. Müller
BMCBI
2010
106views more  BMCBI 2010»
13 years 5 months ago
A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes
Background: Observed co-expression of a group of genes is frequently attributed to co-regulation by shared transcription factors. This assumption has led to the hypothesis that pr...
Guofeng Meng, Axel Mosig, Martin Vingron
FUIN
2010
136views more  FUIN 2010»
13 years 2 months ago
Modeling Biology using Generic Reactive Animation
Abstract. Complex biological systems involve incorporated behaviors of numerous processes, mechanisms and objects. However, experimental analysis, by its nature, divides biological...
Yaki Setty, Irun R. Cohen, David Harel