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    TRETS
    2010
    58views more  TRETS 2010»
    Hardware-Accelerated RNA Secondary-Structure Alignment
    12 years 11 months ago
    Hardware-Accelerated RNA Secondary-Structure Alignment
    Download  www.arl.wustl.edu
    James Moscola, Ron K. Cytron, Young H. Cho
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    BIBE
    2006
    IEEE
    132views Bioinformatics» more  BIBE 2006»
    Simplicity in RNA Secondary Structure Alignment: Towards biologically plausible alignments
    13 years 10 months ago
    Simplicity in RNA Secondary Structure Alignment: Towards biologically plausible alignments
    Download  webdocs.cs.ualberta.ca
    Ribonucleic acid (RNA) molecules contain the genetic information that regulates the functions of organisms. Given two different molecules, a preserved function corresponds to a pr...
    Rimon Mikhaiel, Guohui Lin, Eleni Stroulia
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    BMCBI
    2005
    306views more  BMCBI 2005»
    A method for aligning RNA secondary structures and its application to RNA motif detection
    13 years 4 months ago
    A method for aligning RNA secondary structures and its application to RNA motif detection
    Download  www.biomedcentral.com
    Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
    Jianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tia...
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    ICASSP
    2008
    IEEE
    125views Signal Processing» more  ICASSP 2008»
    Probabilistic structural alignment of RNA sequences
    13 years 11 months ago
    Probabilistic structural alignment of RNA sequences
    Download  www.ece.rochester.edu
    We propose an algorithm for estimating the common secondary structure, alignment, and posterior base pairing probabilities for two RNA sequences. A definition of structural align...
    Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
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    BIOINFORMATICS
    2007
    76views more  BIOINFORMATICS 2007»
    RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment
    13 years 4 months ago
    RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment
    Download  ural.wustl.edu
    Xing Xu, Yongmei Ji, Gary D. Stormo
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