84 search results - page 1 / 17 » Hierarchical graphs for rule-based modeling of biochemical s... |
BMCBI
2011
12 years 11 months ago
2011
Background: In rule-based modeling, graphs are used to represent molecules: a colored vertex represents a component of a molecule, a vertex attribute represents the internal state...
FORTE
2010
13 years 5 months ago
2010
Abstract. Rule-based specifications have been very successful as a declarative approach in many domains, due to the handy yet solid foundations offered by rule-based machineries li...
VL
2000
IEEE
13 years 8 months ago
2000
IEEE
This paper outlines DIAPLAN, a visual rule-based programming language and environment that is based on the computational model of graph transformation. Thanks to its genericity, D...
BIBE
2007
IEEE
13 years 8 months ago
2007
IEEE
Multi-state molecules and multi-component complexes are commonly involved in cellular signaling. Accounting for molecules that have multiple potential states, such as a protein tha...
TAGT
1998
Springer
13 years 8 months ago
1998
Springer
Reactive systems perform their tasks through interaction with their users or with other systems (as parts of a bigger system). An essential requirement for modeling such systems is...