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BMCBI
2005
89views more  BMCBI 2005»
13 years 6 months ago
Theme discovery from gene lists for identification and viewing of multiple functional groups
Background: High throughput methods of the genome era produce vast amounts of data in the form of gene lists. These lists are large and difficult to interpret without advanced com...
Petri Pehkonen, Garry Wong, Petri Töröne...
FM
2009
Springer
138views Formal Methods» more  FM 2009»
14 years 24 days ago
What Can Formal Methods Bring to Systems Biology?
This position paper argues that the operational modelling approaches from the formal methods community can be applied fruitfully within the systems biology domain. The results can ...
Nicola Bonzanni, K. Anton Feenstra, Wan Fokkink, E...
RTSS
2005
IEEE
13 years 11 months ago
Event Count Automata: A State-Based Model for Stream Processing Systems
Recently there has been a growing interest in models and methods targeted towards the (co)design of stream processing applications; e.g. those for audio/video processing. Streams ...
Samarjit Chakraborty, Linh T. X. Phan, P. S. Thiag...
WECWIS
1999
IEEE
102views ECommerce» more  WECWIS 1999»
13 years 10 months ago
Monitoring and Prediction of Network Performance
Analysis of network and application pegormance is traditionally based on mathematical models derived from first principles. Such models are usually complex, diflcult to use, and d...
Bjorn Frogner, Alexander B. Cannara
BMCBI
2008
105views more  BMCBI 2008»
13 years 6 months ago
SIGMA2: A system for the integrative genomic multi-dimensional analysis of cancer genomes, epigenomes, and transcriptomes
Background: High throughput microarray technologies have afforded the investigation of genomes, epigenomes, and transcriptomes at unprecedented resolution. However, software packa...
Raj Chari, Bradley P. Coe, Craig Wedseltoft, Marie...