11 search results - page 1 / 3 » Highly Scalable and Accurate Seeds for Subsequence Alignment |
BIBE
2005
IEEE
13 years 10 months ago
2005
IEEE
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
BMCBI
2008
13 years 4 months ago
2008
Background: To meet the needs of gene annotation for newly sequenced organisms, optimized spaced seeds can be implemented into cross-species sequence alignment programs to accurat...
CSB
2005
IEEE
13 years 10 months ago
2005
IEEE
We have employed various sequence alignment algorithms and scoring techniques to determine whether current computational tools accurately predict genes that will be off-targeted b...
BIBM
2008
IEEE
13 years 11 months ago
2008
IEEE
We develop a parallel algorithm for a widely used whole genome alignment method called LAGAN. We use the MPI-based protocol to develop parallel solutions for two phases of the alg...
TIP
2010
12 years 11 months ago
2010
One weakness in the existing interactive image segmentation algorithms is the lack of more intelligent ways to understand the intention of user inputs. In this paper, we advocate t...