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    BMCBI
    2008
    114views more  BMCBI 2008»
    Combining classifiers for improved classification of proteins from sequence or structure
    13 years 9 months ago
    Combining classifiers for improved classification of proteins from sequence or structure
    Download  www.kyb.tuebingen.mpg.de
    Background: Predicting a protein's structural or functional class from its amino acid sequence or structure is a fundamental problem in computational biology. Recently, there...
    Iain Melvin, Jason Weston, Christina S. Leslie, Wi...
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    BMCBI
    2007
    153views more  BMCBI 2007»
    A new pairwise kernel for biological network inference with support vector machines
    13 years 9 months ago
    A new pairwise kernel for biological network inference with support vector machines
    Download  www.biomedcentral.com
    Background: Much recent work in bioinformatics has focused on the inference of various types of biological networks, representing gene regulation, metabolic processes, protein-pro...
    Jean-Philippe Vert, Jian Qiu, William Stafford Nob...
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    BMCBI
    2011
    230views Artificial Intelligence» more  BMCBI 2011»
    DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning
    13 years 4 months ago
    DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning
    Download  www.biomedcentral.com
    Background: Accurate identification of protein domain boundaries is useful for protein structure determination and prediction. However, predicting protein domain boundaries from a...
    Jesse Eickholt, Xin Deng, Jianlin Cheng
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    EVOW
    2007
    Springer
    151views Artificial Intelligence» more  EVOW 2007»
    Classification of Cell Fates with Support Vector Machine Learning
    14 years 1 months ago
    Classification of Cell Fates with Support Vector Machine Learning
    Download  www.princeton.edu
    In human mesenchymal stem cells the envelope surrounding the nucleus, as visualized by the nuclear lamina, has a round and flat shape. The lamina structure is considerably deformed...
    Ofer M. Shir, Vered Raz, Roeland W. Dirks, Thomas ...
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    CIBB
    2008
    138views Artificial Intelligence» more  CIBB 2008»
    Analysis of Kernel Based Protein Classification Strategies Using Pairwise Sequence Alignment Measures
    13 years 11 months ago
    Analysis of Kernel Based Protein Classification Strategies Using Pairwise Sequence Alignment Measures
    Download  net.icgeb.org
    Abstract. We evaluated methods of protein classification that use kernels built from BLAST output parameters. Protein sequences were represented as vectors of parameters (e.g. simi...
    Dino Franklin, Somdutta Dhir, Sándor Pongor
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