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INFORMS
2010
138views more  INFORMS 2010»
13 years 4 months ago
Pruning Moves
The concept of dominance among nodes of a branch-decision tree, although known since a long time, is not exploited by general-purpose Mixed-Integer Linear Programming (MILP) enume...
Matteo Fischetti, Domenico Salvagnin
BMCBI
2011
13 years 17 days ago
DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning
Background: Accurate identification of protein domain boundaries is useful for protein structure determination and prediction. However, predicting protein domain boundaries from a...
Jesse Eickholt, Xin Deng, Jianlin Cheng
JCC
2008
88views more  JCC 2008»
13 years 5 months ago
A self-organizing algorithm for molecular alignment and pharmacophore development
Abstract: We present a method for simultaneous three-dimensional (3D) structure generation and pharmacophorebased alignment using a self-organizing algorithm called Stochastic Prox...
Deepak Bandyopadhyay, Dimitris K. Agrafiotis
ASPLOS
2010
ACM
14 years 12 days ago
MacroSS: macro-SIMDization of streaming applications
SIMD (Single Instruction, Multiple Data) engines are an essential part of the processors in various computing markets, from servers to the embedded domain. Although SIMD-enabled a...
Amir Hormati, Yoonseo Choi, Mark Woh, Manjunath Ku...
IMC
2009
ACM
14 years 1 days ago
Triangle inequality variations in the internet
Triangle inequality violations (TIVs) are important for latency sensitive distributed applications. On one hand, they can expose opportunities to improve network routing by findi...
Cristian Lumezanu, Randolph Baden, Neil Spring, Bo...