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BIOCOMP
2006
13 years 5 months ago
Improving the Efficiency of Sorting by Reversals
Sorting signed permutations by reversals is a fundamental problem in computationial molecular biology. In this paper we present an improved algorithm for sorting by reversals. Our...
Yijie Han
IPL
2008
86views more  IPL 2008»
13 years 4 months ago
A more efficient algorithm for perfect sorting by reversals
We describe a new algorithm for the problem of perfect sorting a signed permutation by reversals. The worst-case time complexity of this algorithm is parameterized by the maximum p...
Sèverine Bérard, Cedric Chauve, Chri...
JCSS
2008
80views more  JCSS 2008»
13 years 4 months ago
Improved bounds on sorting by length-weighted reversals
We study the problem of sorting binary sequences and permutations by length-weighted reversals. We consider a wide class of cost functions, namely f( ) = for all 0, where is the...
Michael A. Bender, Dongdong Ge, Simai He, Haodong ...
ITIIS
2010
183views more  ITIIS 2010»
13 years 2 months ago
Reversible Watermarking Method Using Optimal Histogram Pair Shifting Based on Prediction and Sorting
To be reversible as a data hiding method, the original content and hidden message should be completely recovered. One important objective of this approach is to achieve high embed...
Hee Joon Hwang, Hyoung Joong Kim, Vasiliy Sachnev,...
CPM
2004
Springer
107views Combinatorics» more  CPM 2004»
13 years 8 months ago
Sorting by Reversals in Subquadratic Time
The problem of sorting a signed permutation by reversals is inspired by genome rearrangements in computational molecular biology. Given two genomes represented as two signed permut...
Eric Tannier, Marie-France Sagot