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    BIOINFORMATICS
    2006
    124views more  BIOINFORMATICS 2006»
    Probabilistic inference of transcription factor concentrations and gene-specific regulatory activities
    13 years 5 months ago
    Probabilistic inference of transcription factor concentrations and gene-specific regulatory activities
    Download  eprints.pascal-network.org
    Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
    Guido Sanguinetti, Neil D. Lawrence, Magnus Rattra...
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    BMCBI
    2004
    146views more  BMCBI 2004»
    Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
    13 years 5 months ago
    Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
    Download  www.biomedcentral.com
    Background: Functional genomics studies are yielding information about regulatory processes in the cell at an unprecedented scale. In the yeast S. cerevisiae, DNA microarrays have...
    Feng Gao, Barrett C. Foat, Harmen J. Bussemaker
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    BMEI
    2008
    IEEE
    145views Biomedical Imaging» more  BMEI 2008»
    Using Phylogenetic Relationships to Improve the Inference of Transcriptional Regulatory Networks
    13 years 12 months ago
    Using Phylogenetic Relationships to Improve the Inference of Transcriptional Regulatory Networks
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    Inferring transcriptional regulatory networks from geneexpression data remains a challenging problem, in part because of the noisy nature of the data and the lack of strong networ...
    Xiuwei Zhang, Maryam Zaheri, Bernard M. E. Moret
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    BMCBI
    2007
    168views more  BMCBI 2007»
    Bayesian model-based inference of transcription factor activity
    13 years 5 months ago
    Bayesian model-based inference of transcription factor activity
    Download  www.biomedcentral.com
    Background: In many approaches to the inference and modeling of regulatory interactions using microarray data, the expression of the gene coding for the transcription factor is co...
    Simon Rogers, Raya Khanin, Mark Girolami
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    BIOINFORMATICS
    2006
    118views more  BIOINFORMATICS 2006»
    A probabilistic dynamical model for quantitative inference of the regulatory mechanism of transcription
    13 years 5 months ago
    A probabilistic dynamical model for quantitative inference of the regulatory mechanism of transcription
    Download  eprints.pascal-network.org
    Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
    Guido Sanguinetti, Magnus Rattray, Neil D. Lawrenc...
    claim paper
    Read More »
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