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» Instance-Based Matching of Large Life Science Ontologies
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CADE
2006
Springer
14 years 5 months ago
CEL - A Polynomial-Time Reasoner for Life Science Ontologies
CEL (Classifier for EL) is a reasoner for the small description logic EL+ which can be used to compute the subsumption hierarchy induced by EL+ ontologies. The most distinguishing ...
Franz Baader, Carsten Lutz, Boontawee Suntisrivara...
CORR
2010
Springer
170views Education» more  CORR 2010»
13 years 5 months ago
Rule-based Generation of Diff Evolution Mappings between Ontology Versions
Ontologies such as taxonomies, product catalogs or web directories are heavily used and hence evolve frequently to meet new requirements or to better reflect the current instance d...
Michael Hartung, Anika Gross, Erhard Rahm
IJMMS
2007
142views more  IJMMS 2007»
13 years 5 months ago
Using OWL to model biological knowledge
Much has been written of the facilities for ontology building and reasoning offered for ontologies expressed in the Web Ontology Language (OWL). Less has been written about how th...
Robert Stevens, Mikel Egaña Aranguren, Katy...
BMCBI
2008
141views more  BMCBI 2008»
13 years 5 months ago
Ontology-guided data preparation for discovering genotype-phenotype relationships
Complexity of post-genomic data and multiplicity of mining strategies are two limits to Knowledge Discovery in Databases (KDD) in life sciences. Because they provide a semantic fr...
Adrien Coulet, Malika Smaïl-Tabbone, Pascale ...
CIKM
2005
Springer
13 years 10 months ago
Exact match search in sequence data using suffix trees
We study suitable indexing techniques to support efficient exact match search in large biological sequence databases. We propose a suffix tree (ST) representation, called STA-DF, ...
Mihail Halachev, Nematollaah Shiri, Anand Thamildu...