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PADL
2001
Springer
13 years 8 months ago
Interoperability between Bioinformatics Tools: A Logic Programming Approach
The goal of this project is to develop solutions to enhance interoperability between bioinformatics applications. Most existing applications adopt different data formats, forcing ...
Juan Raymundo Iglesias, Gopal Gupta, Enrico Pontel...
BMCBI
2004
131views more  BMCBI 2004»
13 years 3 months ago
A web services choreography scenario for interoperating bioinformatics applications
Background: Very often genome-wide data analysis requires the interoperation of multiple databases and analytic tools. A large number of genome databases and bioinformatics applic...
Remko de Knikker, Youjun Guo, Jin-long Li, Albert ...
WCRE
2000
IEEE
13 years 8 months ago
Next Generation Data Interchange: Tool-to-Tool Application Program Interfaces
Data interchange in the form of a standard exchange format(SEF) is only a first step towards tool interoperability. Inter-tool communication using files is slow and cumbersome; a ...
Susan Elliott Sim
DILS
2007
Springer
13 years 9 months ago
Bioinformatics Service Reconciliation by Heterogeneous Schema Transformation
This paper focuses on the problem of bioinformatics service reconciliation in a generic and scalable manner so as to enhance interoperability in a highly evolving field. Using XML...
Lucas Zamboulis, Nigel J. Martin, Alexandra Poulov...
BMCBI
2010
149views more  BMCBI 2010»
13 years 3 months ago
S3DB core: a framework for RDF generation and management in bioinformatics infrastructures
Background: Biomedical research is set to greatly benefit from the use of semantic web technologies in the design of computational infrastructure. However, beyond well defined res...
Jonas S. Almeida, Helena F. Deus, Wolfgang Maass