Sciweavers

27 search results - page 2 / 6
» Interpreting large visual similarity matrices
Sort
View
BMCBI
2008
164views more  BMCBI 2008»
13 years 5 months ago
Word correlation matrices for protein sequence analysis and remote homology detection
Background: Classification of protein sequences is a central problem in computational biology. Currently, among computational methods discriminative kernel-based approaches provid...
Thomas Lingner, Peter Meinicke
BMCBI
2008
163views more  BMCBI 2008»
13 years 5 months ago
ProfileGrids as a new visual representation of large multiple sequence alignments: a case study of the RecA protein family
Background: Multiple sequence alignments are a fundamental tool for the comparative analysis of proteins and nucleic acids. However, large data sets are no longer manageable for v...
Alberto I. Roca, Albert E. Almada, Aaron C. Abajia...
ICMCS
2007
IEEE
159views Multimedia» more  ICMCS 2007»
13 years 11 months ago
Blog Antenna: Summarization of Personal Blog Temporal Dynamics Based on Self-Similarity Factorization
In this paper, we present a framework to analyze and summarize the temporal dynamics within personal blogs. Blog temporal dynamics are difficult to capture using a few class descr...
Yu-Ru Lin, Hari Sundaram
VISSOFT
2002
IEEE
13 years 10 months ago
Metrics-Based 3D Visualization of Large Object-Oriented Programs
In this paper a new approach for a metrics based software visualization is presented which supports an efficient and effective quality assessment of large object-oriented software...
Claus Lewerentz, Frank Simon
BMCBI
2010
111views more  BMCBI 2010»
13 years 5 months ago
Protein sequences classification by means of feature extraction with substitution matrices
Background: This paper deals with the preprocessing of protein sequences for supervised classification. Motif extraction is one way to address that task. It has been largely used ...
Rabie Saidi, Mondher Maddouri, Engelbert Mephu Ngu...