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» JSSPrediction: a Framework to Predict Protein Secondary Stru...
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CBMS
2006
IEEE
13 years 11 months ago
JSSPrediction: a Framework to Predict Protein Secondary Structures Using Integration
Identifying protein secondary structures is a difficult task. Recently, a lot of software tools for protein secondary structures prediction have been produced and made available ...
Luigi Palopoli, Simona E. Rombo, Giorgio Terracina...
BMCBI
2006
137views more  BMCBI 2006»
13 years 5 months ago
Improving the accuracy of protein secondary structure prediction using structural alignment
Background: The accuracy of protein secondary structure prediction has steadily improved over the past 30 years. Now many secondary structure prediction methods routinely achieve ...
Scott Montgomerie, Shan Sundararaj, Warren J. Gall...
BIOINFORMATICS
2010
87views more  BIOINFORMATICS 2010»
13 years 5 months ago
Improving protein secondary structure prediction using a simple k-mer model
Motivation: Existing methods for protein sequence analysis are generally firstorder and inherently assume that each position is independent. We develop a general framework for int...
Martin Madera, Ryan Calmus, Grant Thiltgen, Kevin ...
JCB
2000
146views more  JCB 2000»
13 years 4 months ago
Bayesian Segmentation of Protein Secondary Structure
We present a novel method for predicting the secondary structure of a protein from its amino acid sequence. Most existing methods predict each position in turn based on a local wi...
Scott C. Schmidler, Jun S. Liu, Douglas L. Brutlag
BMCBI
2011
12 years 12 months ago
DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning
Background: Accurate identification of protein domain boundaries is useful for protein structure determination and prediction. However, predicting protein domain boundaries from a...
Jesse Eickholt, Xin Deng, Jianlin Cheng