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» LINNAEUS: A species name identification system for biomedica...
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BMCBI
2010
154views more  BMCBI 2010»
13 years 5 months ago
LINNAEUS: A species name identification system for biomedical literature
Background: The task of recognizing and identifying species names in biomedical literature has recently been regarded as critical for a number of applications in text and data min...
Martin Gerner, Goran Nenadic, Casey M. Bergman
LREC
2008
103views Education» more  LREC 2008»
13 years 6 months ago
Learning the Species of Biomedical Named Entities from Annotated Corpora
In biomedical articles, terms with the same surface forms are often used to refer to different entities across a number of model organisms, in which case determining the species b...
Xinglong Wang, Claire Grover
CICLING
2007
Springer
13 years 9 months ago
Rule-Based Protein Term Identification with Help from Automatic Species Tagging
In biomedical articles, terms often refer to different protein entities. For example, an arbitrary occurrence of term p53 might denote thousands of proteins across a number of spec...
Xinglong Wang
BMCBI
2006
154views more  BMCBI 2006»
13 years 5 months ago
Automated recognition of malignancy mentions in biomedical literature
Background: The rapid proliferation of biomedical text makes it increasingly difficult for researchers to identify, synthesize, and utilize developed knowledge in their fields of ...
Yang Jin, Ryan T. McDonald, Kevin Lerman, Mark A. ...
BMCBI
2005
151views more  BMCBI 2005»
13 years 4 months ago
ProMiner: rule-based protein and gene entity recognition
Background: Identification of gene and protein names in biomedical text is a challenging task as the corresponding nomenclature has evolved over time. This has led to multiple syn...
Daniel Hanisch, Katrin Fundel, Heinz-Theodor Mevis...