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» Large scale genomic sequence SVM classifiers
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BMCBI
2010
93views more  BMCBI 2010»
13 years 5 months ago
Hybridization thermodynamics of NimbleGen Microarrays
Background: While microarrays are the predominant method for gene expression profiling, probe signal variation is still an area of active research. Probe signal is sequence depend...
Ulrike Mückstein, Germán G. Leparc, Al...
BMCBI
2008
114views more  BMCBI 2008»
13 years 5 months ago
TiGER: A database for tissue-specific gene expression and regulation
Background: Understanding how genes are expressed and regulated in different tissues is a fundamental and challenging question. However, most of currently available biological dat...
Xiong Liu, Xueping Yu, Donald J. Zack, Heng Zhu, J...
BMCBI
2004
146views more  BMCBI 2004»
13 years 5 months ago
Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
Background: Functional genomics studies are yielding information about regulatory processes in the cell at an unprecedented scale. In the yeast S. cerevisiae, DNA microarrays have...
Feng Gao, Barrett C. Foat, Harmen J. Bussemaker
ISD
1999
Springer
149views Database» more  ISD 1999»
13 years 9 months ago
Cost-Effective Determination of Biomass from Aerial Images
This paper describes an ongoing collaborative research program between the Computer Science and the Forestry and Wildlife Management Departments at the University of Massachusetts...
Howard J. Schultz, Dana Slaymaker, Chris Holmes, F...
BMCBI
2005
128views more  BMCBI 2005»
13 years 5 months ago
Transformation and other factors of the peptide mass spectrometry pairwise peak-list comparison process
Background: Biological Mass Spectrometry is used to analyse peptides and proteins. A mass spectrum generates a list of measured mass to charge ratios and intensities of ionised pe...
Witold E. Wolski, Maciej Lalowski, Peter Martus, R...