14 search results - page 1 / 3 » Local alignment of generalized k-base encoded DNA sequence |
BMCBI
2010
13 years 4 months ago
2010
Background: DNA sequence comparison is a well-studied problem, in which two DNA sequences are compared using a weighted edit distance. Recent DNA sequencing technologies however o...
HICSS
1994
IEEE
13 years 8 months ago
1994
IEEE
A method is described for identification and classification of proteins encoded in large DNA sequences. Previously, an automated system was introduced for the general detection of...
BIB
2006
13 years 4 months ago
2006
One of the major goals of computational sequence analysis is to find sequence similarities, which could serve as evidence of structural and functional conservation, as well as of ...
BIBM
2009
IEEE
13 years 8 months ago
2009
IEEE
We describe an algorithm for finding approximate seeds for DNA homology searches. In contrast to previous algorithms that use exact or spaced seeds, our approximate seeds may conta...
BIBE
2006
IEEE
13 years 10 months ago
2006
IEEE
DNA sequence alignment is a critical step in identifying homology between organisms. The most widely used alignment program, ClustalW, is known to suffer from the local minima pro...