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BMCBI
2010
132views more  BMCBI 2010»
13 years 5 months ago
Data structures and compression algorithms for high-throughput sequencing technologies
Background: High-throughput sequencing (HTS) technologies play important roles in the life sciences by allowing the rapid parallel sequencing of very large numbers of relatively s...
Kenny Daily, Paul Rigor, Scott Christley, Xiaohui ...
GECCO
2008
Springer
145views Optimization» more  GECCO 2008»
13 years 6 months ago
Memory with memory: soft assignment in genetic programming
Based in part on observations about the incremental nature of most state changes in biological systems, we introduce the idea of Memory with Memory in Genetic Programming (GP), wh...
Nicholas Freitag McPhee, Riccardo Poli
PPOPP
2006
ACM
13 years 11 months ago
Performance characterization of molecular dynamics techniques for biomolecular simulations
Large-scale simulations and computational modeling using molecular dynamics (MD) continues to make significant impacts in the field of biology. It is well known that simulations...
Sadaf R. Alam, Jeffrey S. Vetter, Pratul K. Agarwa...
SPAA
1993
ACM
13 years 9 months ago
Asymptotically Tight Bounds for Performing BMMC Permutations on Parallel Disk Systems
d Abstract) Thomas H. Cormen Leonard F. Wisniewski Department of Mathematics and Computer Science Dartmouth College We give asymptotically equal lower and upper bounds for the num...
Thomas H. Cormen, Leonard F. Wisniewski