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BIOINFORMATICS
2007
88views more  BIOINFORMATICS 2007»
13 years 3 months ago
Maximum likelihood of phylogenetic networks
Horizontal gene transfer (HGT) is believed to be ubiquitous among bacteria, and plays a major role in their genome diversification as well as their ability to develop resistance t...
Guohua Jin, Luay Nakhleh, Sagi Snir, Tamir Tuller
GECCO
2005
Springer
150views Optimization» more  GECCO 2005»
13 years 9 months ago
A GA for maximum likelihood phylogenetic inference using neighbour-joining as a genotype to phenotype mapping
Evolutionary relationships among species can be represented by a phylogenetic tree and inferred by optimising some measure of fitness, such as the statistical likelihood of the t...
Leon Poladian
APBC
2004
132views Bioinformatics» more  APBC 2004»
13 years 5 months ago
Identifying Character Non-Independence in Phylogenetic Data Using Data Mining Techniques
Undiscovered relationships in a data set may confound analyses, particularly those that assume data independence. Such problems occur when characters used for phylogenetic analyse...
Anne M. Maglia, Jennifer L. Leopold, Venkat Ram Gh...
TCBB
2010
166views more  TCBB 2010»
13 years 2 months ago
Approximate Maximum Parsimony and Ancestral Maximum Likelihood
— We explore the maximum parsimony (MP) and ancestral maximum likelihood (AML) criteria in phylogenetic tree reconstruction. Both problems are NP hard, so we seek approximate sol...
Noga Alon, Benny Chor, Fabio Pardi, Anat Rapoport