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» Measuring the Diversity of a Test Set With Distance Entropy
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SIGIR
2012
ACM
11 years 7 months ago
Explicit relevance models in intent-oriented information retrieval diversification
The intent-oriented search diversification methods developed in the field so far tend to build on generative views of the retrieval system to be diversified. Core algorithm compon...
Saul Vargas, Pablo Castells, David Vallet
BMCBI
2010
154views more  BMCBI 2010»
13 years 4 months ago
EnvMine: A text-mining system for the automatic extraction of contextual information
Background: For ecological studies, it is crucial to count on adequate descriptions of the environments and samples being studied. Such a description must be done in terms of thei...
Javier Tamames, Victor de Lorenzo
BMCBI
2008
110views more  BMCBI 2008»
13 years 4 months ago
Determining significance of pairwise co-occurrences of events in bursty sequences
Background: Event sequences where different types of events often occur close together arise, e.g., when studying potential transcription factor binding sites (TFBS, events) of ce...
Niina Haiminen, Heikki Mannila, Evimaria Terzi
ICMLA
2010
13 years 2 months ago
Smoothing Gene Expression Using Biological Networks
Gene expression (microarray) data have been used widely in bioinformatics. The expression data of a large number of genes from small numbers of subjects are used to identify inform...
Yue Fan, Mark A. Kon, Shinuk Kim, Charles DeLisi
BIOINFORMATICS
2011
12 years 11 months ago
All-atom knowledge-based potential for RNA structure prediction and assessment
Motivation: Over the recent years, the vision that RNA simply serves as information transfer molecule has dramatically changed. The study of the sequence/structure/function relati...
Emidio Capriotti, Tomás Norambuena, Marc A....