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» Microarray data mining using landmark gene-guided clustering
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BMCBI
2006
155views more  BMCBI 2006»
13 years 4 months ago
AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data
Background: DNA microarrays are a powerful tool for monitoring the expression of tens of thousands of genes simultaneously. With the advance of microarray technology, the challeng...
Guoqing Lu, The V. Nguyen, Yuannan Xia, Michael Fr...
ICDM
2006
IEEE
129views Data Mining» more  ICDM 2006»
13 years 10 months ago
Consensus Clustering for Detection of Overlapping Clusters in Microarray Data
Most clustering algorithms are partitional in nature, assigning each data point to exactly one cluster. However, several real world datasets have inherently overlapping clusters i...
Meghana Deodhar, Joydeep Ghosh
KDD
2004
ACM
237views Data Mining» more  KDD 2004»
14 years 5 months ago
Bayesian Model-Averaging in Unsupervised Learning From Microarray Data
Unsupervised identification of patterns in microarray data has been a productive approach to uncovering relationships between genes and the biological process in which they are in...
Mario Medvedovic, Junhai Guo
BMCBI
2008
204views more  BMCBI 2008»
13 years 4 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
KDD
2003
ACM
133views Data Mining» more  KDD 2003»
14 years 5 months ago
Interactive Analysis of Gene Interactions Using Graphical gaussian model
DNA microarray provides a powerful basis for analysis of gene expression. Data mining methods such as clustering have been widely applied to microarray data to link genes that sho...
Xintao Wu, Yong Ye, Kalpathi R. Subramanian