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» Mining Protein Sequences for Motifs
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BIBE
2009
IEEE
126views Bioinformatics» more  BIBE 2009»
13 years 11 months ago
Mining Positional Association Super-Rules on Fixed-Size Protein Sequence Motifs
— Protein sequence motifs information is crucial to the analysis of biologically significant regions. The conserved regions have the potential to determine the role of the protei...
Bernard Chen, Sinan Kockara
CSB
2005
IEEE
115views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Mining Protein Sequence Motifs Representing Common 3D Structures
Understanding the relationship between protein structure and its sequence is one of the most important tasks of current bioinformatics research. In this work, recurring protein se...
Wei Zhong, Gulsah Altun, Robert W. Harrison, Phang...
ICDM
2009
IEEE
152views Data Mining» more  ICDM 2009»
13 years 11 months ago
SLIDER: Mining Correlated Motifs in Protein-Protein Interaction Networks
Correlated motif mining (CMM) is the problem to find overrepresented pairs of patterns, called motif pairs, in interacting protein sequences. Algorithmic solutions for CMM thereb...
Peter Boyen, Frank Neven, Dries Van Dyck, Aalt-Jan...
BMCBI
2004
229views more  BMCBI 2004»
13 years 4 months ago
Automatic annotation of protein motif function with Gene Ontology terms
Background: Conserved protein sequence motifs are short stretches of amino acid sequence patterns that potentially encode the function of proteins. Several sequence pattern search...
Xinghua Lu, Chengxiang Zhai, Vanathi Gopalakrishna...
JCB
2002
61views more  JCB 2002»
13 years 4 months ago
Mining Protein Sequences for Motifs
Giri Narasimhan, Changsong Bu, Yuan Gao, Xuning Wa...