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» Molecular Surface Abstraction
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IPPS
2010
IEEE
13 years 3 months ago
Measuring properties of molecular surfaces using ray casting
Molecular geometric properties, such as volume, exposed surface area, and occurrence of internal cavities, are important inputs to many applications in molecular modeling. In this ...
Mike Phillips, Iliyan Georgiev, Anna Katharina Deh...
GMP
2006
IEEE
118views Solid Modeling» more  GMP 2006»
13 years 11 months ago
Geometric Modeling of Nano Structures with Periodic Surfaces
Commonly used boundary-based solid and surface modeling methods in traditional computer aided design are not capable of constructing configurations with large numbers of particles ...
Yan Wang
WCE
2007
13 years 6 months ago
A Patch-by-Patch Shape Matching Procedure for Rigid Body Docking
Abstract—Docking simulates molecular interactions. Protein - protein docking, owing to the sizes of molecules, is a very challenging problem. As the number of degrees of freedom ...
Vipin K. Tripathi
ALGORITHMICA
1999
84views more  ALGORITHMICA 1999»
13 years 5 months ago
Computational Approaches to Drug Design
Abstract. The rational approach to pharmaceutical drug design begins with an investigation of the relationship between chemical structure and biological activity. Information gaine...
Paul W. Finn, Lydia E. Kavraki
GMP
2006
IEEE
108views Solid Modeling» more  GMP 2006»
13 years 11 months ago
Towards Unsupervised Segmentation of Semi-rigid Low-Resolution Molecular Surfaces
In this paper, we study a particular type of surface segmentation problem motivated by molecular biology applications. In particular, two input surfaces are given, coarsely modeli...
Yusu Wang, Leonidas J. Guibas