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    CPHYSICS
    2006
    95views more  CPHYSICS 2006»
    Multibillion-atom molecular dynamics simulation: Design considerations for vector-parallel processing
    13 years 4 months ago
    Multibillion-atom molecular dynamics simulation: Design considerations for vector-parallel processing
    Download  www.ph.biu.ac.il
    Progress in adapting molecular dynamics algorithms for systems with short-range interactions to utilize the features of modern supercomputers is described. Efficient utilization o...
    D. C. Rapaport
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    BMCBI
    2006
    179views more  BMCBI 2006»
    Multiscale Hy3S: Hybrid stochastic simulation for supercomputers
    13 years 4 months ago
    Multiscale Hy3S: Hybrid stochastic simulation for supercomputers
    Download  www.dtc.umn.edu
    Background: Stochastic simulation has become a useful tool to both study natural biological systems and design new synthetic ones. By capturing the intrinsic molecular fluctuation...
    Howard Salis, Vassilios Sotiropoulos, Yiannis N. K...
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