Sciweavers

84 search results - page 1 / 17
» Multiple grid methods for classical molecular dynamics
Sort
View
JCC
2002
81views more  JCC 2002»
13 years 4 months ago
Multiple grid methods for classical molecular dynamics
: Presented in the context of classical molecular mechanics and dynamics are multilevel summation methods for the fast calculation of energies/forces for pairwise interactions, whi...
Robert D. Skeel, Ismail Tezcan, David J. Hardy
ICA3PP
2005
Springer
13 years 10 months ago
GridMD: Program Architecture for Distributed Molecular Simulation
In the present work we describe architectural concepts of the distributed molecular simulation package GridMD. The main purpose of this work is to underline the construction patter...
Ilya Valuev
IMR
2003
Springer
13 years 10 months ago
Multiple Stationary and Moving Boundary Handling in Cartesian Grids
A Cartesian grid generation methodology is developed for unsteady control volume computational fluid dynamic (CFD) solvers. Arbitrary combinations and numbers of moving and statio...
Kerem Pekkan
IPMI
2007
Springer
14 years 5 months ago
Rao-Blackwellized Marginal Particle Filtering for Multiple Object Tracking in Molecular Bioimaging
Modern live cell fluorescence microscopy imaging systems, used abundantly for studying intra-cellular processes in vivo, generate vast amounts of noisy image data that cannot be pr...
Ihor Smal, Katharina Draegestein, Niels Galjart, W...
BMCBI
2008
163views more  BMCBI 2008»
13 years 5 months ago
ProfileGrids as a new visual representation of large multiple sequence alignments: a case study of the RecA protein family
Background: Multiple sequence alignments are a fundamental tool for the comparative analysis of proteins and nucleic acids. However, large data sets are no longer manageable for v...
Alberto I. Roca, Albert E. Almada, Aaron C. Abajia...