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» NOTUNG: A Program for Dating Gene Duplications and Optimizin...
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JCB
2000
137views more  JCB 2000»
13 years 4 months ago
NOTUNG: A Program for Dating Gene Duplications and Optimizing Gene Family Trees
Large scale gene duplication is a major force driving the evolution of genetic functional innovation. Whole genome duplications are widely believed to have played an important rol...
Kevin Chen, Dannie Durand, Martin Farach-Colton
RECOMB
2000
Springer
13 years 8 months ago
Notung: dating gene duplications using gene family trees
Kevin Chen, Dannie Durand, Martin Farach-Colton
NAR
2007
117views more  NAR 2007»
13 years 3 months ago
FGF: A web tool for Fishing Gene Family in a whole genome database
Gene duplication is an important process in evolution. The availability of genome sequences of a number of organisms has made it possible to conduct comprehensive searches for dup...
Hongkun Zheng, Junjie Shi, Xiaodong Fang, Yuan Li,...
WABI
2004
Springer
116views Bioinformatics» more  WABI 2004»
13 years 9 months ago
Topological Rearrangements and Local Search Method for Tandem Duplication Trees
—The problem of reconstructing the duplication history of a set of tandemly repeated sequences was first introduced by Fitch [4]. Many recent studies deal with this problem, show...
Denis Bertrand, Olivier Gascuel
BMCBI
2005
113views more  BMCBI 2005»
13 years 4 months ago
PentaPlot: A software tool for the illustration of genome mosaicism
Background: Dekapentagonal maps depict the phylogenetic relationships of five genomes in a visually appealing diagram and can be viewed as an alternative to a single evolutionary ...
Lutz Hamel, Olga Zhaxybayeva, J. Peter Gogarten