24 search results - page 1 / 5 » Network-on-Chip Hardware Accelerators for Biological Sequenc... |
TC
2010
13 years 3 months ago
2010
—The most pervasive compute operation carried out in almost all bioinformatics applications is pairwise sequence homology detection (or sequence alignment). Due to exponentially ...
VLSISP
2010
12 years 11 months ago
2010
We propose a new parallelization scheme for the hmmsearch function of the HMMER software, in order to target FPGA technology. hmmsearch is a very compute intensive software for bio...
IPPS
2010
IEEE
13 years 3 months ago
2010
IEEE
The Smith-Waterman (SW) algorithm is one of the widely used algorithms for sequence alignment in computational biology. With the growing size of the sequence database, there is alw...
BMCBI
2008
13 years 5 months ago
2008
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
INFOSCALE
2006
ACM
13 years 11 months ago
2006
ACM
Abstract— Comparing genetic sequences is a well-known problem in bioinformatics. Newly determined sequences are being compared to known sequences stored in databases in order to ...