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BMCBI
2008
139views more  BMCBI 2008»
13 years 5 months ago
New challenges for text mining: mapping between text and manually curated pathways
Background: Associating literature with pathways poses new challenges to the Text Mining (TM) community. There are three main challenges to this task: (1) the identification of th...
Kanae Oda, Jin-Dong Kim, Tomoko Ohta, Daisuke Okan...
BMCBI
2007
165views more  BMCBI 2007»
13 years 4 months ago
Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
Carlos Rodríguez Penagos, Heladia Salgado, ...
NLDB
2005
Springer
13 years 10 months ago
Combining Biological Databases and Text Mining to Support New Bioinformatics Applications
Abstract. A large amount of biological knowledge today is only available from full-text research papers. Since neither manual database curators nor users can keep up with the rapid...
René Witte, Christopher J. O. Baker
KDD
2005
ACM
185views Data Mining» more  KDD 2005»
14 years 5 months ago
Mining comparable bilingual text corpora for cross-language information integration
Integrating information in multiple natural languages is a challenging task that often requires manually created linguistic resources such as a bilingual dictionary or examples of...
Tao Tao, ChengXiang Zhai
BMCBI
2005
117views more  BMCBI 2005»
13 years 4 months ago
An evaluation of GO annotation retrieval for BioCreAtIvE and GOA
Background: The Gene Ontology Annotation (GOA) database http://www.ebi.ac.uk/GOA aims to provide high-quality supplementary GO annotation to proteins in the UniProt Knowledgebase....
Evelyn Camon, Daniel Barrell, Emily Dimmer, Vivian...