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» Number of Occurrences of powers in Strings
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IJFCS
2010
67views more  IJFCS 2010»
13 years 3 months ago
Number of Occurrences of powers in Strings
Abstract. We show a Θ(n log n) bound on the maximal number of occurrences of primitively-rooted k-th powers occurring in a string of length n for any integer k, k ≥ 2. We also s...
Maxime Crochemore, Szilárd Zsolt Fazekas, C...
WEA
2004
Springer
150views Algorithms» more  WEA 2004»
13 years 10 months ago
Increased Bit-Parallelism for Approximate String Matching
Abstract. Bit-parallelism permits executing several operations simultaneously over a set of bits or numbers stored in a single computer word. This technique permits searching for t...
Heikki Hyyrö, Kimmo Fredriksson, Gonzalo Nava...
IWOCA
2009
Springer
117views Algorithms» more  IWOCA 2009»
13 years 9 months ago
On the Maximal Number of Cubic Subwords in a String
We investigate the problem of the maximum number of cubic subwords (of the form www) in a given word. We also consider square subwords (of the form ww). The problem of the maximum ...
Marcin Kubica, Jakub Radoszewski, Wojciech Rytter,...
BMCBI
2007
114views more  BMCBI 2007»
13 years 5 months ago
False occurrences of functional motifs in protein sequences highlight evolutionary constraints
Background: False occurrences of functional motifs in protein sequences can be considered as random events due solely to the sequence composition of a proteome. Here we use a nume...
Allegra Via, Pier Federico Gherardini, Enrico Ferr...
MFCS
2007
Springer
13 years 11 months ago
Structural Analysis of Gapped Motifs of a String
Abstract. We investigate the structure of the set of gapped motifs (repeated patterns with don’t cares) of a given string of symbols. A natural equivalence classification is int...
Esko Ukkonen