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» On Finding Graph Clusterings with Maximum Modularity
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BMCBI
2007
115views more  BMCBI 2007»
13 years 5 months ago
Correlation between structure and temperature in prokaryotic metabolic networks
Background: In recent years, an extensive characterization of network structures has been made in an effort to elucidate design principles of metabolic networks, providing valuabl...
Kazuhiro Takemoto, Jose C. Nacher, Tatsuya Akutsu
HPCC
2007
Springer
13 years 11 months ago
On Pancyclicity Properties of OTIS Networks
The OTIS-Network (also referred to as two-level swapped network) is composed of n clones of an n-node original network constituting its clusters. It has received much attention due...
Mohammad R. Hoseinyfarahabady, Hamid Sarbazi-Azad
BMCBI
2008
116views more  BMCBI 2008»
13 years 5 months ago
Algorithm of OMA for large-scale orthology inference
Since the publication of our article (Roth, Gonnet, and Dessimoz: BMC Bioinformatics 2008 9: 518), we have noticed several errors, which we correct in the following. Correction We...
Alexander C. J. Roth, Gaston H. Gonnet, Christophe...
NIPS
2007
13 years 6 months ago
Fixing Max-Product: Convergent Message Passing Algorithms for MAP LP-Relaxations
We present a novel message passing algorithm for approximating the MAP problem in graphical models. The algorithm is similar in structure to max-product but unlike max-product it ...
Amir Globerson, Tommi Jaakkola