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» On Recovering Syntenic Blocks from Comparative Maps
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BMCBI
2005
97views more  BMCBI 2005»
13 years 5 months ago
Comparative mapping of sequence-based and structure-based protein domains
Background: Protein domains have long been an ill-defined concept in biology. They are generally described as autonomous folding units with evolutionary and functional independenc...
Ya Zhang, John-Marc Chandonia, Chris H. Q. Ding, S...
BMCBI
2008
131views more  BMCBI 2008»
13 years 5 months ago
CoCoNUT: an efficient system for the comparison and analysis of genomes
Background: Comparative genomics is the analysis and comparison of genomes from different species. This area of research is driven by the large number of sequenced genomes and hea...
Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohl...
VLDB
1999
ACM
188views Database» more  VLDB 1999»
13 years 10 months ago
Comparing Hierarchical Data in External Memory
We present an external-memory algorithm for computing a minimum-cost edit script between two rooted, ordered, labeled trees. The I/O, RAM, and CPU costs of our algorithm are, resp...
Sudarshan S. Chawathe
CVPR
2012
IEEE
11 years 8 months ago
From label fusion to correspondence fusion: A new approach to unbiased groupwise registration
Label fusion strategies are used in multi-atlas image segmentation approaches to compute a consensus segmentation of an image, given a set of candidate segmentations produced by r...
Paul A. Yushkevich, Hongzhi Wang, John Pluta, Bria...
ICIAP
2009
ACM
14 years 4 months ago
Fuzzy Smoothed Composition of Local Mapping Transformations for Non-rigid Image Registration
This paper presents a novel method for medical image registration. The global transformation is obtained by composing affine transformations, which are recovered locally from giv...
Edoardo Ardizzone, Orazio Gambino, Roberto Gallea,...