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» On The Closest String and Substring Problems
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CPM
2004
Springer
110views Combinatorics» more  CPM 2004»
13 years 11 months ago
On the k-Closest Substring and k-Consensus Pattern Problems
Given a set S = {s1, s2, . . . , sn} of strings each of length m, and an integer L, we study the following two problems. k-Closest Substring problem: find k center strings c1, c2,...
Yishan Jiao, Jingyi Xu, Ming Li
GECCO
2009
Springer
152views Optimization» more  GECCO 2009»
13 years 10 months ago
A data-based coding of candidate strings in the closest string problem
Given a set of strings S of equal lengths over an alphabet Σ, the closest string problem seeks a string over Σ whose maximum Hamming distance to any of the given strings is as s...
Bryant A. Julstrom
APPROX
2005
Springer
90views Algorithms» more  APPROX 2005»
13 years 11 months ago
Tight Bounds for String Reconstruction Using Substring Queries
We resolve two open problems presented in [8]. First, we consider the problem of reconstructing an unknown string T over a fixed alphabet using queries of the form “does the st...
Dekel Tsur
COCOON
2010
Springer
13 years 9 months ago
A Three-String Approach to the Closest String Problem
Given a set of n strings of length L and a radius d, the closest string problem (CSP for short) asks for a string tsol that is within a Hamming distance of d to each of the given ...
Zhi-Zhong Chen, Bin Ma, Lusheng Wang
CORR
2010
Springer
156views Education» more  CORR 2010»
13 years 5 months ago
The Exact Closest String Problem as a Constraint Satisfaction Problem
We report (to our knowledge) the first evaluation of Constraint Satisfaction as a computational framework for solving closest string problems. We show that careful consideration o...
Tom Kelsey, Lars Kotthoff