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ICDE
2004
IEEE
115views Database» more  ICDE 2004»
14 years 6 months ago
Unordered Tree Mining with Applications to Phylogeny
Frequent structure mining (FSM) aims to discover and extract patterns frequently occurring in structural data, such as trees and graphs. FSM finds many applications in bioinformat...
Dennis Shasha, Jason Tsong-Li Wang, Sen Zhang
INFOVIS
2002
IEEE
13 years 10 months ago
Case Study: Visualizing Sets of Evolutionary Trees
We describe a visualization tool which allows a biologist to explore a large set of hypothetical evolutionary trees. Interacting with such a dataset allows the biologist to identi...
Nina Amenta, Jeff Klingner
BMCBI
2005
113views more  BMCBI 2005»
13 years 5 months ago
PentaPlot: A software tool for the illustration of genome mosaicism
Background: Dekapentagonal maps depict the phylogenetic relationships of five genomes in a visually appealing diagram and can be viewed as an alternative to a single evolutionary ...
Lutz Hamel, Olga Zhaxybayeva, J. Peter Gogarten
JUCS
2008
172views more  JUCS 2008»
13 years 5 months ago
A Hybrid Transgenetic Algorithm for the Prize Collecting Steiner Tree Problem
: Evolutionary algorithms are effective search tools for tackling difficult optimization problems. In this paper an algorithm based on living processes where cooperation is the mai...
Elizabeth Ferreira Gouvea Goldbarg, Marco Cé...