96 search results - page 1 / 20 » Optimal neighborhood indexing for protein similarity search |
BMCBI
2008
13 years 4 months ago
2008
Background: Similarity inference, one of the main bioinformatics tasks, has to face an exponential growth of the biological data. A classical approach used to cope with this data ...
DATESO
2007
13 years 6 months ago
2007
When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
ISMB
2003
13 years 5 months ago
2003
We consider the problem of finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements). Later, ...
CSB
2005
IEEE
13 years 10 months ago
2005
IEEE
Similarity search leveraging distance-based index structures is increasingly being used for both multimedia and biological database applications. We consider distance-based indexi...
CSB
2003
IEEE
13 years 9 months ago
2003
IEEE
We propose two methods for finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements) of prote...