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HPDC
2010
IEEE
13 years 6 months ago
MPIPairwiseStatSig: parallel pairwise statistical significance estimation of local sequence alignment
Sequence comparison is considered as a cornerstone application in bioinformatics, which forms the basis of many other applications. In particular, pairwise sequence alignment is a...
Ankit Agrawal, Sanchit Misra, Daniel Honbo, Alok N...
IVC
2007
91views more  IVC 2007»
13 years 5 months ago
Evolutionary approach to inverse planning in coplanar radiotherapy
A unified evolutionary approach to coplanar radiotherapy inverse planning is proposed. It consists of a genetic algorithm-based framework that solves with little modification tr...
Vitoantonio Bevilacqua, Giuseppe Mastronardi, Gius...
BMCBI
2002
109views more  BMCBI 2002»
13 years 5 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
JSC
2006
102views more  JSC 2006»
13 years 5 months ago
Counting and locating the solutions of polynomial systems of maximum likelihood equations, I
In statistics, mixture models consisting of several component subpopulations are used widely to model data drawn from heterogeneous sources. In this paper, we consider maximum lik...
Max-Louis G. Buot, Donald St. P. Richards
BMCBI
2011
12 years 9 months ago
Inference of Chromosome-Specific Copy Numbers Using Population Haplotypes
Background: Using microarray and sequencing platforms, a large number of copy number variations (CNVs) have been identified in humans. In practice, because our human genome is a d...
Yao-Ting Huang, Min-Han Wu