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2005
Tsinghua U.
13 years 10 months ago
Optimization of MPI collective communication on BlueGene/L systems
BlueGene/L is currently the world’s fastest supercomputer. It consists of a large number of low power dual-processor compute nodes interconnected by high speed torus and collect...
George Almási, Philip Heidelberger, Charles...
SC
2005
ACM
13 years 10 months ago
A Scalable Distributed Parallel Breadth-First Search Algorithm on BlueGene/L
Many emerging large-scale data science applications require searching large graphs distributed across multiple memories and processors. This paper presents a distributed breadth...
Andy Yoo, Edmond Chow, Keith W. Henderson, Will Mc...
SPAA
2006
ACM
13 years 11 months ago
Astronomical real-time streaming signal processing on a Blue Gene/L supercomputer
LOFAR is the first of a new generation of radio telescopes, that combines the signals from many thousands of simple, fixed antennas, rather than from expensive dishes. Its revol...
John W. Romein, P. Chris Broekema, Ellen van Meije...
PVM
2009
Springer
13 years 11 months ago
Fine-Grained Data Distribution Operations for Particle Codes
Abstract This paper proposes a new fine-grained data distribution operation MPI Alltoall specific that allows an element-wise distribution of data elements to specific target pro...
Michael Hofmann, Gudula Rünger
CF
2007
ACM
13 years 9 months ago
Parallel genomic sequence-search on a massively parallel system
In the life sciences, genomic databases for sequence search have been growing exponentially in size. As a result, faster sequencesearch algorithms to search these databases contin...
Oystein Thorsen, Brian E. Smith, Carlos P. Sosa, K...