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BMCBI
2011
12 years 8 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
IACR
2011
106views more  IACR 2011»
12 years 4 months ago
Hash Functions Based on Three Permutations: A Generic Security Analysis
We consider the family of 2n-to-n-bit compression functions that are solely based on at most three permutation executions and on XOR-operators, and analyze its collision and preima...
Bart Mennink, Bart Preneel
INFOCOM
2006
IEEE
13 years 11 months ago
Performance of Full Text Search in Structured and Unstructured Peer-to-Peer Systems
— While structured P2P systems (such as DHTs) are often regarded as an improvement over unstructured P2P systems (such as super-peer networks) in terms of routing efficiency, it...
Yong Yang, Rocky Dunlap, Mike Rexroad, Brian F. Co...
VLDB
2007
ACM
130views Database» more  VLDB 2007»
14 years 5 months ago
A Simple and Efficient Estimation Method for Stream Expression Cardinalities
Estimating the cardinality (i.e. number of distinct elements) of an arbitrary set expression defined over multiple distributed streams is one of the most fundamental queries of in...
Aiyou Chen, Jin Cao, Tian Bu
SIGMOD
2009
ACM
171views Database» more  SIGMOD 2009»
14 years 5 months ago
GAMPS: compressing multi sensor data by grouping and amplitude scaling
We consider the problem of collectively approximating a set of sensor signals using the least amount of space so that any individual signal can be efficiently reconstructed within...
Sorabh Gandhi, Suman Nath, Subhash Suri, Jie Liu