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» PDA: Pooled DNA analyzer
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BMCBI
2006
97views more  BMCBI 2006»
13 years 4 months ago
PDA: Pooled DNA analyzer
Background: Association mapping using abundant single nucleotide polymorphisms is a powerful tool for identifying disease susceptibility genes for complex traits and exploring pos...
Hsin-Chou Yang, Chia-Ching Pan, Chin-Yu Lin, Cathy...
BMCBI
2008
93views more  BMCBI 2008»
13 years 4 months ago
MPDA: Microarray pooled DNA analyzer
Background: Microarray-based pooled DNA experiments that combine the merits of DNA pooling and gene chip technology constitute a pivotal advance in biotechnology. This new techniq...
Hsin-Chou Yang, Mei-Chu Huang, Ling-Hui Li, Chien-...
BMCBI
2010
124views more  BMCBI 2010»
13 years 4 months ago
GPFrontend and GPGraphics: graphical analysis tools for genetic association studies
Background: Most software packages for whole genome association studies are non-graphical, purely text based programs originally designed to run with UNIX-like operating systems. ...
Steffen Uebe, Francesca Pasutto, Mandy Krumbiegel,...
BIOINFORMATICS
2010
170views more  BIOINFORMATICS 2010»
13 years 4 months ago
Joint estimation of DNA copy number from multiple platforms
DNA copy number variants (CNV) are gains and losses of segments of chromosomes, and comprise an important class of genetic variation. Recently, various microarray hybridization ba...
Nancy R. Zhang, Yasin Senbabaoglu, Jun Z. Li
BMCBI
2010
133views more  BMCBI 2010»
13 years 4 months ago
Data analysis issues for allele-specific expression using Illumina's GoldenGate assay
Background: High-throughput measurement of allele-specific expression (ASE) is a relatively new and exciting application area for array-based technologies. In this paper, we explo...
Matthew E. Ritchie, Matthew S. Forrest, Antigone S...