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» PIES, A Protein Interaction Extraction System
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BMCBI
2007
181views more  BMCBI 2007»
13 years 5 months ago
Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases
Background: In recent years, mammalian protein-protein interaction network databases have been developed. The interactions in these databases are either extracted manually from lo...
Seth I. Berger, Jeremy M. Posner, Avi Ma'ayan
BMCBI
2006
166views more  BMCBI 2006»
13 years 5 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
BMCBI
2010
153views more  BMCBI 2010»
13 years 5 months ago
PPLook: an automated data mining tool for protein-protein interaction
Background: Extracting and visualizing of protein-protein interaction (PPI) from text literatures are a meaningful topic in protein science. It assists the identification of inter...
Shao-Wu Zhang, Yao-Jun Li, Li Xia, Quan Pan
ISMIS
2005
Springer
13 years 11 months ago
Getting Computers to See Information Graphics So Users Do Not Have to
Abstract. Information graphics such as bar, line and pie charts appear frequently in electronic media and often contain information that is not found elsewhere in documents. Unfort...
Daniel Chester, Stephanie Elzer
KES
2005
Springer
13 years 11 months ago
gProt: Annotating Protein Interactions Using Google and Gene Ontology
With the increasing amount of biomedical literature, there is a need for automatic extraction of information to support biomedical researchers. Due to incomplete biomedical informa...
Rune Sætre, Amund Tveit, Martin Thorsen Rana...