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» PSI: indexing protein structures for fast similarity search
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BMCBI
2006
120views more  BMCBI 2006»
13 years 5 months ago
Projections for fast protein structure retrieval
Background: In recent times, there has been an exponential rise in the number of protein structures in databases e.g. PDB. So, design of fast algorithms capable of querying such d...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
BMCBI
2010
113views more  BMCBI 2010»
13 years 5 months ago
Efficient protein alignment algorithm for protein search
Background: Proteins show a great variety of 3D conformations, which can be used to infer their evolutionary relationship and to classify them into more general groups; therefore ...
Zaixin Lu, Zhiyu Zhao, Bin Fu
ICDE
2006
IEEE
239views Database» more  ICDE 2006»
13 years 11 months ago
Grid Representation for Efficient Similarity Search in Time Series Databases
Widespread interest in time-series similarity search has made more in need of efficient technique, which can reduce dimensionality of the data and then to index it easily using a ...
Guifang Duan, Yu Suzuki, Kyoji Kawagoe
BMCBI
2010
122views more  BMCBI 2010»
13 years 5 months ago
Fast and accurate protein substructure searching with simulated annealing and GPUs
Background: Searching a database of protein structures for matches to a query structure, or occurrences of a structural motif, is an important task in structural biology and bioin...
Alex Stivala, Peter J. Stuckey, Anthony Wirth
JCP
2006
232views more  JCP 2006»
13 years 5 months ago
Indexing of Motion Capture Data for Efficient and Fast Similarity Search
As motion capture systems are increasingly used for motion tracking and capture, and more and more surveillance cameras are installed for security protection, more and more motion ...
Chuanjun Li, B. Prabhakaran